Fluorescent dyes are essential tools for life sciences imaging and molecular tracing, covering a broad spectral range from ultraviolet to near-infrared. Based on their chemical structures, fluorescent dyes can be classified into cyanine dyes (Cy series), rhodamines, fluoresceins, BODIPY dyes, oxazines, and others.

Each class offers distinct performance advantages:

Dye Class Key Advantages
Cyanine dyes High molar extinction coefficients, tunable wavelengths – ideal for deep-tissue imaging
Rhodamines Excellent photostability, high fluorescence quantum yields – widely used in confocal microscopy and flow cytometry
Fluoresceins Good water solubility, high biocompatibility – classic choices for immunofluorescence and in situ hybridization
BODIPY dyes Narrow spectra, pH-insensitive – suitable for multicolor imaging and membrane dynamics studies

In recent years, sulfo-modified dyes have gained widespread adoption for live-cell labeling and protein conjugation due to their significantly enhanced water solubility and reduced non-specific adsorption. Meanwhile, functionalized dyes carrying reactive groups (NHS esters, maleimides, azides, alkynes) have further advanced click chemistry and site-specific biolabeling.

At the application level, fluorescent dyes have become deeply integrated into numerous fields, including:

  • Gene sequencing (e.g., multiplex fluorescence capillary electrophoresis)

  • qPCR probes

  • Immunofluorescence staining

  • Live-cell dynamic tracing

  • Small animal in vivo imaging

Related Products:

Cyanine Dyes

Product CAS Cat.
Cy5, 97%
195867-59-5 9415958
Cy5 SE, 95%
350686-88-3 9415956
Cy5 DIC18, 97%
75539-51-4 9415959
Cy5 DIME, 95%
48221-03-0 9415961
Cy 5, 97%
146368-15-2 971453
Cy5.5, 95%
1144107-80-1 925723
Cy7, 97%
1144107-78-7 984171
Cy7(Me).TEA, 97%
1251915-04-4 954107
Cy7 SE, 95%
/ 9436784
Cy7 DIME, 95%
/ 9436785
Cy7 NHS Ester, 98%
477908-53-5 985913
Cy3 DIC18, 97%
22366-93-4 9415954
Cy3 DIME, 95%
25470-94-4 9395852
Cy3 SE, 95%
1032678-38-8 965829
Cy3.5-SE, 95%
871518-83-1 9150732
Cy2 DiC18 (3), 95%
40957-95-7 9436783

Functional Derivatives of Cyanine Dyes

Product CAS Cat.
sulfo Cy3 YNE, 95%
1010386-62-5 2286486
sulfo Cy3.5, 95%
1284240-77-2 2138351
sulfo Cy3-mal.TFA, 95%
616207-80-8 9415994
sulfo Cy3-NH2.TFA, 95%
/ 9436779
sulfo Cy3-N3, 95%
/ 9436778
sulfo Cy5-YNE, 95%
1345823-20-2 2286481
sulfo Cy5(Et) MAL, 95%
1160761-43-2 9415940
sulfo Cy5(Et)NH2.HCl, 95%
455253-09-5 9416004
sulfo Cy5 NH2, 95%
2183440-44-8 9436787
Sulfo-Cy5(Me)-acid.TEA, 97%
1121756-16-8 2579123
sulfo Cy7.5, 95%
847180-48-7 9416011

BODIPY fluorescent dyes

Product CAS Cat.
BDP FL N2H3, 95%
178388-71-1 9436791
BDP R6G, 97%
174881-57-3 9423600
BDP558 Acid, 97%
150173-72-1 9423603
BDP558 SE, 95%
150173-73-2 9423602
BDP576-SE, 95%
201998-61-0 9292996
BDP581, 97%
480999-04-0 9415939

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By 李艳

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