5-methylcytosine modification (5mC) is one of the important epigenetic modifications in eukaryotic cell genomes. 5mC can be gradually oxidized under the action of TET family enzymes to generate 5-hydroxymethylcytosine (5hmC), 5-aldehydecytosine (5fC) and 5-carboxycytosine (5caC); for the above-mentioned several new DNA modifications Functional research is currently a hot spot in nucleic acid epigenetics.
Among them, the research on 5-aldehyde cytosine (5fC) faces greater challenges. Since the content of 5fC in cell tissues is very small (0.02% - 0.002% cytosine level), scientists first need to find a high-efficiency, high-selectivity method. method to enrich 5fC. All current enrichment methods are based on bisulfite treatment, which is not only costly, but also causes DNA degradation and reduces experimental efficiency [1] .
J&K provides a new 5fC detection kit developed by researcher Yichengqi. It is mainly used for single-base resolution determination of 5fC on the genome; it can also be used to study the biological functions of 5fC in biological development and disease occurrence and development [2] .
Product advantages
- No bisulfite treatment is required, the reaction is mild and will not cause DNA degradation;
- DNA samples containing 5fC sequences are first enriched and then sequenced, greatly reducing sequencing costs;
- It can be applied to the sequencing of precious clinical DNA samples.
Figure 1 Without bisulfite treatment, DNA samples containing 5fC sequences can be enriched before sequencing [1]
Reference
- Bo Xia, Dali Han, Xingyu Lu, Zhaozhu Sun, Ankun Zhou, Qiangzong Yin, Hu Zeng, Menghao Liu, Xiang Jiang, Wei Xie, Chuan He, Chengqi Yi. Nat Methods. 2015, 12 (11), 1047-50.
- Chenxu Zhu, Yun Gao, Hongshan Guo, ..., Kehkooi Kee, Fuchou Tang, Chengqi Yi. Cell Stem Cell. 2017, 20 (5), 720-731.